H5N1 From South Africa (2004 low path)

Author: cfz     03 12th, 2010 in enart.abczj.com     edit

  • H5N1 sequences from South Africa were released today

    1: EF041486 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047866) Reports (javascript:PopUpMenu2_Set(Reports116047866)) Links (javascript:PopUpMenu2_Set(Menu116047866);)

    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 1 polymerase B2 (PB2) gene, partial cds
    gi116047866gbEF041486.1[116047866]
    2: EF041485 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047864) Reports (javascript:PopUpMenu2_Set(Reports116047864)) Links (javascript:PopUpMenu2_Set(Menu116047864);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 2 polymerase B1 (PB1) gene, partial cds
    gi116047864gbEF041485.1[116047864]

    3: EF041484 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047862) Reports (javascript:PopUpMenu2_Set(Reports116047862)) Links (javascript:PopUpMenu2_Set(Menu116047862);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 3 polymerase PA (PA) gene, partial cds
    gi116047862gbEF041484.1[116047862]

    4: EF041483 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047859) Reports (javascript:PopUpMenu2_Set(Reports116047859)) Links (javascript:PopUpMenu2_Set(Menu116047859);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 8 nonstructural protein 1 (NS1) and nonstructural protein 2 (NS2) genes, partial cds
    gi116047859gbEF041483.1[116047859]

    5: EF041482 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047857) Reports (javascript:PopUpMenu2_Set(Reports116047857)) Links (javascript:PopUpMenu2_Set(Menu116047857);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 5 nucleocapsid protein (NP) gene, partial cds
    gi116047857gbEF041482.1[116047857]

    6: EF041481 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047855) Reports (javascript:PopUpMenu2_Set(Reports116047855)) Links (javascript:PopUpMenu2_Set(Menu116047855);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 6 neuraminidase (NA) gene, partial cds
    gi116047855gbEF041481.1[116047855]

    7: EF041480 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047852) Reports (javascript:PopUpMenu2_Set(Reports116047852)) Links (javascript:PopUpMenu2_Set(Menu116047852);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 7 matrix protein 1 (M1) and matrix protein 2 (M2) genes, partial cds
    gi116047852gbEF041480.1[116047852]

    8: EF041479 (http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=116047850) Reports (javascript:PopUpMenu2_Set(Reports116047850)) Links (javascript:PopUpMenu2_Set(Menu116047850);)
    Influenza A virus (A/duck/South Africa/811/2004(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds
    gi116047850gbEF041479.1[116047850]


  • Might there be any parallel between these ducks and the current LPAI H5 found wild birds in the mid-northern US states?:confused:

    .


  • Might there be any parallel between these ducks and the current LPAI H5 found wild birds in the mid-northern US states?:confused:

    .

    These sequences are most closely related to low path H5 in Europe. The LPAI in North America are more likely to have H5N1 sequences from high path in Asia.







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